
Troubleshooting
136
Part # 15035786 Rev. D
Pause a Run
CAUTION
Do not pause a run during imaging. Use the Normal stop, end of cycle or end of lane feature,
to stop and resume a run.
Pause a run from the Run Overview screen. Pausing a run might be necessary to check run
components, such as reagent volumes, before proceeding with the run. Under normal
operation, pausing a run is not necessary.
1 From the Run Overview screen, select Pause. The pause menu opens.
Figure 55 Pause Options
2 Select Normal Pause.
3 Select Yes to confirm the pause command. The software completes the current
chemistry or imaging command and places the flow cell in a safe state.
4 Select Resume to resume the run.
Change Reagents During a Run
If you started the run with a partial volume of reagents, use the Change Reagents feature to
pause the run and replenish reagents.
1 From the Run Overview screen, select Pause. The pause menu opens.
2 Select Change Reagents.
3 Select Yes to confirm the pause command. The software completes the current
chemistry or imaging command, places the flow cell in a safe state, and opens the
Reagents screen.
4 On the Reagents screen, enter the following reagent parameters:
• The reagent kit ID for new reagents.
• The number of cycles the reagents are expected to last.
NOTE
The priming checkbox is disabled on the Change Reagents screen. Priming is not required.
5 Select Next to proceed to loading reagents.
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