Pre-Run Volume Check
HiSeq 2500 System User Guide
75
Pre-Run Volume Check
From the Welcome screen, select Sequence | New Run. The Volume Check screen opens.
Volume Check Screen
1 When prompted by the software to perform a volume check, select Yes.
2 Place waste tubes 1, 2, 3, 6, 7, and 8 for the current flow cell in a 1 liter bottle filled with
deionized water. Placing the tubes in deionized water prevents damage to the reagent
pumps.
3 Load laboratory-grade water into all 8 SBS positions, 10 positions on the paired-end
rack, and the library position for the current flow cell.
4 Close the loading station.
5 Select the Water loaded and template loading station closed checkbox.
6 Select Next.
7 Make sure that a used rapid flow cell is loaded on the instrument. Enter the ID of the
used flow cell.
8 Select Next.
9 Select Pump to confirm flow.
10 Place tubes 4 and 5 into separate empty 15 ml conical tubes.
11 Select Next. The volume check begins.
When the volume check is complete, the expected volume is 9.5 ml ±10% for each tube.
12 Return all tubes to the waste bottle.
13 Select Next.
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