
Primer Rehybridization
HiSeq 2500 System User Guide
137
Primer Rehybridization
A rehybridization run repeats the sequencing primer hybridization step. If run metrics
indicate low cluster numbers, low cluster intensities, or other concerns, perform primer
rehybridization to rescue the flow cell. Primer rehybridization does not damage clusters on
the flow cell.
HiSeq v4 Flow Cell
All rehyb steps are performed on the HiSeq 2500. The kit includes primers for Read 1,
Index 1 Read, Index 2 Read for single-read flow cells, and Read 2.
Rehyb Kit Name Workflow Instructions
HiSeq Multi-Primer Rehyb Kit v4
Catalog # GD-403-4001
HiSeq Primer Rehybridization Guide (part #
15050105)
HiSeq v3 Flow Cell
Read 1 primer rehyb is performed on the cBot. The kit includes a cBot reagent plate
containing the Read 1 sequencing primer HP6. For Nextera libraries, use HP10 from the
TruSeq Dual Index Sequencing Primer Box.
Rehyb Kit Name Workflow Instructions
TruSeq v2 cBot Multi-Primer Rehyb Kit
Catalog # GD-304-2001
Read 1 Primer Rehybridization on the cBot (part #
15018149)
Rapid Flow Cell
All rehyb steps are performed on the HiSeq 2500. The kit includes primers for Read 1,
Index 1 Read, Index 2 Read for single-read flow cells, and Read 2.
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